Selected publications by the group (2009-2017)

2017

Barth, J. M. I., Damerau, M., Matschiner, M., Jentoft, S., Hanel, R. Genomic differentiation and demographic histories of Atlantic and Indo-Pacific yellowfin tuna (Thunnus albacares) populations. Genome Biology and Evolution (accepted).

Fernández-Chacón, A., Moland, E., Espeland, S.H., Kleiven, A.R. and Olsen, E.M. 2017. Causes of mortality in depleted populations of Atlantic cod estimated from multi-event modelling of mark-recapture and recovery data. Canadian Journal of Fisheries and Aquatic Sciences 74: 116-126.

Laurel, B.J., Cote, D., Gregory, R.S., Rogers, L., Knutsen, H. and Olsen, E.M. 2017. Recruitment signals in juvenile cod surveys depend on thermal growth conditions. Canadian Journal of Fisheries and Aquatic Sciences 74: 511-523.

Malmstrøm, M., Matschiner, M., Tørresen, O. K., Jakobsen, K. S., Jentoft, S. 2017. Whole genome sequencing data and de novo draft assemblies for 66 teleost species. Scientific Data. doi:10.1038/sdata.2016.132.

Solbakken, M. H., Voje, K. L., Jakobsen, K. S., Jentoft, S. Linking species habitat and past palaeoclimatic events to evolution of the teleost innate immune system. Proceedings of the Royal Society B (accepted).

Sørhus, E., Incardona, J. P., Furmanek, T., Goetz, G. W., Scholz, N. L., Meier, S., Edvardsen, R. B., Jentoft, S. 2017. Novel adverse outcome pathways revealed by chemical genetics in a developing marine fish. eLIFE. DOI: http://dx.doi.org/10.7554/eLife.20707.

Tørresen, O. K., Star, B., Jentoft, S., Reinar, W. B., Grove, H., Miller, J. R., Walenz, B. P., Knight, J., Ekholm, J. M., Peluso, P., Edvardsen, R. B., Tooming-­Klunderud, A., Skage, M., Lien, S., Jakobsen, K. S., Nederbragt, A. J. 2017. An improved genome assembly uncovers prolific tandem repeats in Atlantic cod. BMC Genomics, 18:95. DOI: 10.1186/s12864-­‐016-­‐3448-­‐x.

Villegas-Ríos, D., Réale, D., Freitas, C., Moland, E. and Olsen, E.M. 2017. Individual level consistency and correlations of fish spatial behaviour assessed from aquatic animal telemetry. Animal Behaviour 124: 83-94.

2016

Andre C., Svedang H., Knutsen H., Dahle G., Jonsson P., Ring A-K., Skold M., Jorde P. E., Population structure in Atlantic cod in the eastern North Sea-Skagerrak-Kattegat: early life stage dispersal and adult migration (2016). BMC Research Notes . ISSN 1756-0500. 9 doi: 10.1186/s13104-016-1878-9

Barceló, C., Ciannelli, L., Olsen, E.M., Johannessen, T. and Knutsen, H. 2016. Eight decades of sampling reveal a contemporary novel fish assemblage in coastal nursery habitats. Global Change Biology 22: 1155-11167.

Berg P. R., Star B., Pampoulie C. Sodeland M., Barth J. M. I., Knutsen H., Jakobsen K., Jentoft S., Three chromosomal rearrangements promote genomic divergence between migratory and stationary ecotypes of Atlantic cod (2016). Scientific Reports . ISSN 2045-2322. doi:10.1038/srep23246. Read more

Catarino D., Knutsen H., Verissimo A., Olsen E. M., Jorde P. E., Menezes G., Sannæs H., Stanković D., Company J. B., Neat F., Danovaro R., Dell’Anno A., Rochowski B., Stefanni S., The Pillars of Hercules as a bathymetric barrier to gene flow promoting isolation in a global deep-sea shark (Centroscymnus coelolepis) (2015). Molecular Ecology . ISSN 0962-1083. 24 (24), s 6061 – 6079 doi:10.1111/mec.13453. Read more

Ellis C., Hodgson DJ, Andre C., Sørdalen T. K., Knutsen H., Griffiths A., Genotype Reconstruction of Paternity in European Lobsters (Homarus gammarus) (2015). PLoS ONE . ISSN 1932-6203. 10 (11), s 1 – 14 doi: 10.1371/journal.pone.0139585. Read more

Freitas, C., Olsen, E.M., Knutsen, H., Albretsen, J. and Moland, E. 2016. Temperature-associated habitat selection in a cold-water marine fish. Journal of Animal Ecology 85: 628-637. Read more

Gante, H., Matschimer, M., Malmstrøm, M., Jakobsen, K., Jentoft, S., Salzburger, W. 2016. Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika. Molecular Ecology. DOI: 10.111/mec.13767.

Halvorsen K, Sørdalen TK, Durif C, Knutsen H, Moland Olsen E, Skiftesvik A B, Emmerhoff Rustand T, Bjelland R M and Vøllestad, A 2016. Male-biased sexual size dimorphism in the nest building corkwing wrasse (Symphodus melops): implications for a size regulated fishery. ICES Journal of Marine Science 73: 2586-2594. DOI:10.1093/icesjms/fsw135.

Kleiven, A.R., Fernández-Chacón, A., Nordahl, J-H., Moland, E., Espeland, S.H., Knutsen, H., Olsen. E.M. 2016.
Harvest pressure on coastal Atlantic cod (Gadus morhua) from recreational fishing relative to commercial fishing assessed from tag-recovery data. PLoS ONE 11: e0149595. Read more

Kuparinen, A., Roney, N.E., Oomen, R.A., Hutchings, J.A. and Olsen, E.M. 2016. Small-scale life history variability suggests potential for spatial mismatches in Atlantic cod management units. ICES Journal of Marine Science 73: 286-292.

Lien S., Koop, B. F., Sandve, S. R., Miller, J. R., Kent, M. P., Nome, T., Hvidsten, T. R., Leong, J., Minkley, D., Zimin, A., Grammes, F., Grove, H., Gjuvsland, A., Walenz, B., Hermansen, R. A., von Schalburg. K, Rondeau, E. B., Di Genova, A., Samy, J. K. A., Vik, J. O., Vigeland, M. D., Caler, L., Grimholt, U., Jentoft, S., Våge, D. I., de Jong, P., Moen, T., Baranski, M., Palti, Y., Smith, D. R., Nederbragt, A. J., Tooming-Klunderud, A., Jakobsen, K. S., Jiang, X., Fan, D., Hu, Y., Liberles, D. A., Vidal, R., Iturra, P., Jones, S. J. M., Jonassen, I., Maass, A., Omholt, S. W., Davidson, W. S. Atlantic salmon genome provides insights into rediploidization. Nature (18 April). 533, 200-205. DOI: 10.1038/nature17164. Read more

Malmstrøm, M., Matschiner, M., Tørresen, O. K., Star, B., Snipen, L. G., Hansen, T. F., Baalsrud, H. T., Nederbragt, A. J., Hanel, R., Salzburger, W., Stenseth, N. C., Jakobsen, K. S., Jentoft, S. 2016. Evolution of the immune system influences speciation rates in teleost fishes. Nature Genetics (22. August). 48, 1204-1210. DOI: 10.1038/ng.3645.

Rinde, E. Tjomsland, T., Hjermann, D.Ø., Kempa, M., Norling, P. and Kolluru V.S. Increased spreading potential of the invasive Pacific oyster (Crassostrea gigas) at its northern distribution limit in Europe due to warmer climate. Marine and Freshwater Research (accepted).

Roney, N.E., Hutchings, J.A., Olsen, E.M., Knutsen, H., Albretsen, J. and Kuparinen, A. 2016. Fine-scale life-history structure in a highly mobile marine fish. Evolutionary Ecology Research 17: 95-109.

Sodeland M., Jorde P. E., Lien S., Jentoft S., Berg P. R., Grove H., Kent M., Arnyasi M., Olsen E. M., Knutsen H., ‘Islands of divergence’ in the Atlantic cod genome represent polymorphic chromosomal rearrangements (2016). Genome Biology and Evolution. DOI: 10.1093/gbe/evw057.

Solbakken, M.H., Rise, M.L., Jakobsen, K.S., Jentoft, S. 2016a. Successive losses of Central immune genes characterize the Gadiformes’ alternate immunity. Genome Biology and Evolution. doi: 10.1093/gbe7evw250.

Solbakken, M. H., Tørresen, O. K., Nederbragt, A. J., Seppola, M., Gregers, T. F., Jakobsen, K. S., Jentoft, S. 2016b. Evolutionary redesign of the Atlantic cod (Gadus morhua L.) Toll-­like receptor repertoire by gene losses and expansions. Nature Scientific Reports. Volume 6, Article number: 25211. DOI:10.1038/srep25211.

Star, B., Tørresen, O. K., Nederbragt, A. J., Jakobsen, K. S., Pampoulie, C., Jentoft, S. 2016. Genomic characterization of the Atlantic cod sex-­locus. Nature Scientific Reports. Volume 6, Article number: 31235. DOI: 10.1038/srep31235.

Sørhus E., Incardona, J., Furmanek, T., Jentoft, S., Meier, S., Edvardsen, R. 2016. Developmental transcriptomics in Atlantic haddock: Illuminating pattern formation and organogenesis in non-model vertebrates. Developmental Biology. DOI:10.1016/j.ydbio.2016.02.012

Sørhus E., Incardona, J. P., Karlsen, Ø., Linbo, T., Sørensen, L., Nordtug, T., van der Meeren, T., Thorsen, A., Thorbjørnsen, M., Jentoft, S., Edvardsen, R. B., Meier, S. 2016. Crude oil exposures reveal roles for intracellular Calcium cycling in haddock craniofacial and cardiac Development. Scientific reports. Volume 6, Article number: 31058. DOI: 10.1038/srep31058.

Trucchi, E., Facon, B., Gratton, P., Mori, E., Stenseth, N. C., Jentoft, S. 2016. Long live the alien: Is high Genetic diversity a pivotal aspect of crested porcupine (Hystrix cristata) long-­lasting and successful invasion? Molecular Ecology. DOI: 10.1111/mec.13698.

2015

Andersen, Ø., Johnsen, De Rosa, M. C., Præbel, K., H., Stjelja, S., Kirubakaran, T. G., Pirolli, D., Jentoft, S. and Fevolden, S. E. Evolutionary history and adaptive significance of the polymorphic Pan I in migratory and stationary populations of Atlantic cod (Gadus morhua). Marine Genomics. doi:10.1016/j.margen.2015.03.009.

Barceló C, Ciannelli L, Olsen EM, Johannessen T, Knutsen H. Eight decades of sampling reveal a contemporary novel fish assemblage in coastal nursery habitat. Global Change Biology. doi: 10.1111/gcb.13047. [0]

Berg, P. R., Jentoft, S., Star, B., Ring, K. H., Knutsen, H., Lien, S., Jakobsen, K. S. André, C. Adaptation to low salinity promotes genomic divergence in Atlantic cod (Gadus morhua L.). Genome Biology and Evolution. doi: 10.1093/gbe/evv093.

Blanco, E, Aritaki, M. Knutsen H., Taniguchi N.; Effects of large-scale releases on the genetic structure of red sea bream (Pagrus major, Temminck et Schlegel) populations in Japan., PLOSONE

Blanco, E., Knutsen H., Jorde P. E., Glover K., Bergstad O. A. Genetic analyses of ling (Molva molva) in the Northeast Atlantic reveal patterns relevant to stock assessments and management advice (2014) Ices J Mar Sci.

Catarino, D., Knutsen, H., Veríssimo, A., Olsen, E.M., Jorde, P.E., Menezes, G., Sannæs, H., Stankovic, D., Company, J.B., Neat, F., Danovao, R., Dell’Anno, A., Rochowski, B. and Stefanni, S. 2015. The Pillars of Hercules as a bathymetric barrier to gene-flow promoting isolation in a global deep-sea shark (Centroscymnus coelolepis). Molecular Ecology 24: 6061–6079.

Ciannelli, L., Bailey, K. and Olsen, E.M. 2015. Evolutionary and ecological constraints of fish spawning habitats. ICES Journal of Marine Science 72: 285–296.

Cortesi, F., Musilová, Z., Stieb, S. M., Hart, N. S., Siebeck, U. E., Malmstrøm, M., Tørresen, O. K., Jentoft, S., Cheney, K. L., Marshall, N. J., Carleton, K. L., and Salzburger, W. 2015. Ancestral duplications and highly dynamic opsin gene evolution in percomorph fishes. PNAS, 112(5), 1493–1498. doi: 10.1073/pnas.1417803112.

Eggers, F., Olsen, E.M., Moland, E. and Slotte, A. 2015. Individual habitat transitions of Atlantic herring (Clupea harengus L.) in a human-modified coastal system. Marine Ecology Progress Series 520: 245–256.

Espeland, S.H., Albretsen, J., Olsen, E.M. and Bodvin, T. 2015. Modelling drift of pelagic offspring: the importance of egg surveys in providing a realistic model initialization. ICES Journal of Marine Science, accepted.

Feng, J., Durant, J.M., Stige, L.C., Hessen, D.O., Hjermann, D.Ø., Zhu, L., Llope, M. and Stenseth, N.C. in press. Contrasting correlation patterns between environmental factors and chlorophyll levels in the global ocean. Global Biogeochemichal Cycles. http://dx.doi.org/10.1002/2015GB005216.

Fernández-Chacón, A., Moland, E., Espeland, S.H. and Olsen, E.M. 2015. Demographic effects of full versus partial protection from harvesting: inference from an empirical before-after control-impact study on Atlantic cod. Journal of Applied Ecology 52: 1206–1215.

Ferter, K., Hartmann, K., Kleiven, A.R., Moland, E. and Olsen, E.M. 2015. Catch-and-release of Atlantic cod (Gadus morhua): post-release behaviour of acoustically pre-tagged fish in a natural marine environment. Canadian Journal of Fisheries and Aquatic Sciences 72: 252–261.

Freitas C, Olsen EM, Moland E, Ciannelli L, Knutsen H (2015) Behavioral responses of Atlantic cod to sea temperature changes. Ecology and Evolution 5: 2070- 2083. [1]

Freitas, C; Olsen, EM; Knutsen, H; Albretsen, J; Moland, E. Temperature-associated habitat selection in a cold-water marine fish. Journal of Animal Ecology, in press

Hagman, C. H. C., Ballot, A. Hjermann, D.Ø., Skjelbred, B., Brettum, P., Ptacnik, R. 2015. The occurrence and spread of Gonyostomum semen (Ehr.) Diesing (Raphidophyceae) in Norwegian lakes. Hydrobiologia: 744: 1-14.

Knutsen H, Jorde PE, Gonzalez EB, Eigaard O, Pereyra RT, Sannæs H, Dahl M, Andre C, Søvik G (2015) Does population genetic structure support present management regulations of the northern shrimp (Pandalus borealis) in Skagerrak and the North Sea? ICES Journal of Marine Science 72: 863-871. [1]

Kuparinen, A., Roney, N.E., Oomen, R.A., Hutchings, J.A. and Olsen, E.M. 2015. Small-scale life-history variability suggests potential for spatial mismatches in Atlantic cod management units. ICES Journal of Marine Science, in press.

Langangen, Ø., Hjermann, D. Ø., Olsen, E., Stige, L.C., Ohlberger, J., Yaragina, N. A., Vikebø, F., Bogstad, B., Stenseth, N. C. Implications of spatial variation in natural mortality on the effects of oil spills on marine fish stocks. Submitted to Proc. of the Royal Society B.

Larsen, M. H., Johnsson, J. I., Winberg, S., Wilson, A. D., Hammenstig, D., Thörnqvist, P. O.. Midwood, J. D. Höglund, E. (2015). Effects of emergence time and early social rearing environment on behaviour of Atlantic salmon: Consequences for juvenile fitness and smolt migration. PloS one, 10(3), e0119127.

Laursen, D. C., B. K. Larsen, P. V. Skov, and E. Höglund. 2015. Improved growth performance in rainbow trout Oncorhynchus mykiss reared at high densities is linked to increas

Ling SD, Scheibling RE, Johnson CR, Rassweiler A, Shears N, Connell SD, Salomon A, Norderhaug KM, Perez-Matus A, Hernandez JC, Clemente S, Blamey L, Hereu B, Ballesteros E, Sala E, Garrabou J, Cebrian E, Zabala M, Fujita D. 2015. Global regime-shift dynamics of catastrophic sea urchin overgrazing. Philosophical Transactions B. 370:20130269. http://dx.doi.org/10.1098/rstb.2013.0269

Norderhaug KM, Gundersen H, Pedersen A, Moy F, Green N, Walday M, Magnusson J, Gitmark J, Ledang AB, Bjerkeng B, Trannum H. 2015. Combined effects from climate variation and eutrophication on the diversity in hard bottom communities on the Skagerrak coast 1990-2010. Mar Ecol Prog Ser 530: 29–46.

Pampoulie, C., Skirnisdottir, S., Star, B., Jentoft, S., Jónsdóttir, I. G., Hjörleifsson, E., Thorsteinsson, V., Pálsson, O. K., Berg, P. R., Andersen, Ø., Magnusdottir, S., Helyar, S. J., Daníelsdóttir, A. K. 2015. Rhodopsin gene polymorphism associated with divergent light environments in Atlantic cod. Behavior Genetics, 45(2): 236-244.

Ramirez-Llodra, E., Trannum, H.C., Evenset, A., Levin, L.A., Andersson, M., Finne, T.E., Hilario, A., Flem, B., Christensen, G., Schaanning, M. & Vanreusel, A. (2015) Submarine and deep-sea mine tailing placements: a review of current practices, environmental issues, natural analogs and knowledge gaps in Norway and internationally. Marine Pollution Bulletin, 97: 13–35.

Shafer, Wolf, Alves, Bergström, Bruford, Brännström, Colling, Dalén, De Meester, Ekblom, Fawcett, Fior, Hajibabaei, Hill, Hoezel, Höglund, Jensen, Krause, Kristensen, Krutzen, McKay, Norman, Ogden, Österling, Ouborg, Piccolo, Popović, Primmer, Reed, Roumet, Salmona, Schenekar, Schwartz, Segelbacher, Senn, Thaulow, Valtonen, Veale, Vergeer, Vijay, Vila, Weissensteiner, Wennerström, Wheat, Zielinski, Aaron B.A., Jochen B.W., Paulo C., Linnea, Michael W., Ioana, Guy, Love, Luc, Robert, Katie D., Simone, Mehrdad, Jason A., A. Rus, Jacob, Evelyn L., Johannes, Torsten N., Michael, John K., Anita J., Rob, E. Martin., N. Joop, John, Danijela, Craig R., Floyd A., Marie, Jordi, Tamara, Michael K., Gernot, Helen, Jens, Mia, Andrew, Philippine, Nagarjun, Carles, Matthias, Lovisa, Christopher W., Piotr] 2015. Genomics and the challenging translation into conservation practice. Trends in Ecology & Evolution , Vol 30 No 2 , 78_87

Star, B., Nederbragt, A. J., Hansen, M., Skage, M., Gilfillan, G., Bradbury, I., Pampoulie, C., Stenseth, N. C., Jakobsen, K. S. and Jentoft, S. 2014. Palindromic sequence artifacts generated during Next Generation Sequencing library preparation from historic and ancient DNA. PLoS ONE. doi: 10.1371/journal.pone.0089676.

Stige, L.C, Langangen, Ø., Yaragina, N.A., Vikebø, F.B., Bogstad, B., Ottersen, G., Stenseth, N.C. and Hjermann, D.Ø. 2015. Combined statistical and mechanistic modelling suggests food and temperature effects on survival of early life stages of Northeast Arctic cod (Gadus morhua). Progress in Oceanography 134: 138–151.

Sørhus, E., Edvardsen, R. B., Karlsen, Ø., Nordtug, T., van der Meeren, T., Thorsen, A., Harman, C., Jentoft, S. and Meier, S. 2015. Unexpected interaction with dispersed crude oil droplets drives severe toxicity in Atlantic haddock embryos. PLoS ONE. doi: 10.1371/journal.pone.0124376.

Thörnqvist, P.-O., E. Höglund, and S. Winberg. 2015. Natural selection constrains personality and brain gene expression differences in Atlantic salmon (Salmo salar). Journal of Experimental Biology 218(7):1077-1083.

Tominaga, K, Finstad AG, Kaste Ø, Andersen T. (submitted) Melting and warming of northern lakes. Hydrol. Earth Syst. Sci. Discuss

Aalvik, I.M., Moland, E., Olsen, E.M. and Stenseth, N.C. 2015. Spatial ecology of coastal Atlantic cod Gadus morhua L. associated with parasite load. Journal of Fish Biology 87: 449–464.

2014

Andersen, Ø., De Rosa, M. C., Yadav, P., Pirolli, D., Fernandes, J. M. O., Berg, P. R., Jentoft, S. and Andrè, C. The conserved Phe GH5 of importance for hemoglobin intersubunit contact is mutated in gadoid fish. BMC Evolutionary Biology. doi: 10.1186/1471-2148-14-54.

Blanco Gonzalez E, Knutsen H, Jorde PE, Glover KA, Bergstad OA. Genetic analysis of ling (Molva molva) in the Northeast Atantic reveal patterns relevant to stock assessments and management advice. ICES Journal of Marine Science (In press).

Eggers, F., Slotte, A., Libungan, L.A., Johannessen, A., Kvamme, C., Moland, E., Olsen, E.M. and Nash, R.D.M. Seasonal dynamics of Atlantic herring (Clupea harengus L.) populations spawning in the vicinity of marginal habitats. PLoS ONE 9: e111985.

Feng, J.F., Stige, L.C., Durant, J.M., Hessen, D.O., Zhu, L., Hjermann, D.Ø., Llope, M., Stenseth, N.C. 2014. Large-scale season-dependent effects of temperature and zooplankton on phytoplankton in the North Atlantic. Marine Ecology Progress Series 502: 25-37.

Fernández-Chacón A, Stefanescu C, Genovart M, Nichols JD, Hines JE, Páramo F, Turco M, Oro D. 2014. Determinants of extinction-colonization dynamics in Mediterranean butterflies: the role of landscape, climate and local habitat features. Journal of Animal Ecology 83: 276–285.

Hildago M, Olsen EM, Ohlberger J, Saborido-Rey F, Murua H, Piñeiro C, Stenseth NC. 2014. Contrasting evolutionary demography induced by fishing: the role of adaptive phenotypic plasticity. Ecological Applications 24: 1101-1114.

Knutsen H, Jorde PE, Blanco Gonzalez E, Eigaard OR, Pereyra RT, Sannæs H, Dahl M, André C, Søvik G. Does population genetic structure support present management regulations of the northern shrimp (Pandalus borealis) in Skagerrak and the North Sea?” ICES Journal of Marine Science (In press).

Longmore C, Trueman CN, Neat F, Jorde PE, Knutsen H, Stefanni S, Catarino D, Milton JA, Mariani S. Oceanic scale connectivity and life cycle reconstruction in a deep-sea fish. Canadian Journal of Fisheries and Aquatic Sciences  (In press).

Olsen EM, Serbezov D, Vøllestad LA. Probabilistic maturation reaction norms assessed from mark-recaptures of wild fish in their natural habitat. Ecology and Evolution 4: 1601-1610.

Quintela M, Danielsen EA, Svåsand T, Knutsen H, Skiftesvik AB, Glover KA. Isolation and characterization of twenty microsatellite loci for the ballan wrasse, Labrus bergylta. Conservation Genetics Resources 6: 425-428.

Rinde, E., Christie, H., Fagerli, C.W., Bekkby, T., Gundersen, H., Norderhaug K.M., Hjermann, D.Ø. The Influence of Physical Factors on Kelp and Sea Urchin Distribution in Previously and Still Grazed Areas in the NE Atlantic. PLoS ONE 9: e100222. DOI:10.1371/journal.pone.0100222

Rogers, L.A., Olsen, E.M., Knutsen, H. and Stenseth, N.C. Habitat effects on population connectivity in a coastal seascape. Marine Ecology Progress Series 511: 153–163.

2013

Blanco Gonzalez E, Aritaki M, Sakurai S, Taniguchi N. 2013. Identification of potential genetic risks associated to large-scale releases in red sea bream based on nuclear and mitochondrial DNA analysis. Marine Biotechnology 15: 206-220.

Bærum KM, Haugen TO, Kiffney P, Olsen EM, Vøllestad LA. 2013. Interacting effects of temperature and density on individual growth performance in a wild population of brown trout. Freshwater Biology 58: 1329–1339.

Fernández-Chacón A, Genovart M, Pradel R, Tavecchia G, Bertolero A, Piccardo J, Forero MG, Afán I, Muntaner J, Oro D. 2013. When to stay, when to disperse and where to go: survival and dispersal patterns in a spatially structured seabird population. Ecography 36:1117–1126.

Genovart M, Sanz-Aguilar A, Fernández-Chacón A, Igual JM, Pradel R, Forero MG, Oro D, Roulin A. 2013. Contrasting effects of climatic variability on the demography of a trans-equatorial migratory seabird. Journal of Animal Ecology 82:121–130.

Huserbråten MBO, Moland E, Knutsen H, Olsen EM, André C, Stenseth NC. 2013. Conservation, spillover and gene flow within a network of northern European marine protected areas. PlosOne. ISSN 1932-6203. 8(9):e73388. doi: 10.1371/journal.pone.0073388.

Knutsen H, Jorde PE, Blanco Gonzalez E, Robalo JI, Albretsen J, Almada V. 2013. Climate change and genetic structure of leading edge and rear end populations in a northwards shifting marine fish species, the corkwing wrasse (Symphodus melops). PlosOne. ISSN 1932-6203 8(6): e67492. doi: 19371/journal.pone.0067492.

Malmstrøm, M., Jentoft, S., Gregers, T. and Jakobsen, K. S. 2013. Unraveling the evolution of the Atlantic cod’s (Gadus morhua L.) alternative immune strategy. PLoS ONE, 8(9): e74004. doi:10.1371/journal.pone.0074004.

Moland E, Olsen EM, Knutsen H, Garrigou P, Espeland SH, Kleiven AR, André C, Knutsen JA. 2013. Lobster and cod benefit from small-scale northern marine protected areas: inference from an empirical before – after control-impact study. Proceedings of the Royal Society of London. Biological Sciences. ISSN 0962-8452. 280(1754). doi:10.1098/rspb.2012.2679.

Moland E, Ulmestrand MA, Olsen EM, Stenseth NC. 2013. Long term decrease in sex-specific natural mortality of European lobster within a marine protected area. Marine Ecology Progress Series 491:153-164

Star, B., Haverkamp, T. H. A., Jentoft, S., and Jakobsen, K. S. 2013. Next generation sequencing shows high variation of the intestinal microbial species composition in Atlantic cod caught at a single location. BMC Microbiology, 13:248. doi:10.1186/1471-2180-13-248.

Taniguchi N, Blanco Gonzalez E, Noguchi D. 2013. Genetic population structure and risk simulation of stock enhancement program. In: Aritaki, M. (Ed.). Stock enhancement and risk management for coastal fishery resources – Monitoring on genetic diversity and efficiency of stock enhancement, Kouseisha Kouseikaku, pp. 110-127 (in Japanese).

Wiig JR, Moland E, Haugen TO, Olsen EM. 2013. Spatially structured interactions between lobsters and lobster fishers in a coastal habitat: fine-scale behaviour and survival estimated from acoustic telemetry. Canadian Journal of Fisheries and Aquatic Sciences 70:1-9.

2012

Bartolino V, Ciannelli L, Spencer P, Wilderbauer T, Chan KS. 2012. Scale-dependent depletion of natural populations. Marine Ecology Progress Series 444: 251-272

Blanco Gonzalez E, Aritaki M, Taniguchi N. 2012. Microsatellite multiplex panels for genetic studies of red sea bream. Fisheries Science 78: 603-611.

Blanco Gonzalez E, Umino U. 2012. Managing the genetic resources in the intensive stock enhancement program carried out on black sea bream in Hiroshima Bay. In: Caliskan M (ed.) Analysis of genetic variation in animals, InTech, Rijeka, pp 217-230.

Chen K, Chan KS, Bailey KM, Ciannelli L, Aydin K (2012) A probabilistic cellular automata approach for predator-prey interactions of arrowtooth flounder (Atheresthes stomias) and walleye pollock (Theragra chalcogramma) in the eastern Bering Sea. Canadian Journal of Fisheries and Aquatic Sciences 69(2): 259-272

Freitas C, Kovacs KM, Andersen M, Aars J, Sandven S, Skern-Mauritzen S, Pavlova O & Lydersen C. 2012. Importance of fast ice and glacier fronts for female polar bears and their cubs during spring in Svalbard, Norway. Marine Ecology Progress Series 447: 289-304.

Hidalgo M, Gusdal Y, Dingsør GE, Hjermann D, Ottersen G, Stige LC, Melsom A, Stenseth NC. 2012. A combination of hydrodynamical and statistical modelling reveals non-stationary climate effects on fish larvae distributions. Proceedings of the Royal Society of London. Biological Sciences: 279(1727): 275- 283.

Hidalgo M, Rouyer T, Bartolino V, Cervino S, Ciannelli L, Massuti E, Jadaud A, Saborido-Rey F, Durant JM, Santurtun M, Pinero C, Stenseth NC 2012. Context-dependent interplays between truncated demographies and climate variation shape the population growth rate of a harvested species. Ecography 35: 637-649.

Kleiven AR, Olsen EM, Vølstad JH. 2012. Total catch of a red-listed marine species is an order of magnitude higher than official data. PLoS ONE 7: e31216.

Knutsen H, Jorde PE, Bergstad OA, Skogen M. 2012. Population genetic structure in a deepwater fish Coryphaenoides rupestris: patterns and processes. Marine Ecology Progress Series. ISSN 0171-8630. 460, s 233- 246. doi: 10.3354/meps09728.

Lydersen C, Freitas C, Wiig Ø, Bachmann L, Heide-Jorgensen MP, Swift R and Kovacs KM. 2012. Lost highway not forgotten: satellite tracking of a bowhead whale (Balaena mysticetus) from the critically endangered Spitsbergen stock. Arctic 65: 76-86.

Olsen EM, Heupel MR, Simpfendorfer CA, Moland E. 2012. Harvest selection on Atlantic cod behavioral traits: implications for spatial management. Ecology and Evolution 2: 1549-1562.

Otero J, Jensen AJ, L’abee-Lund, JH, Stenseth NC, Storvik GO, Vøllestad LA. 2012. Contemporary ocean warming and freshwater conditions are related to later sea age at maturity in Atlantic salmon spawning in Norwegian rivers. Ecology and Evolution: 2(92): s2192- 2203.

Pereyra RT, Westgaard, JI, Dahl M, Johansen T, Knutsen H, Ring A-K, Søvik G, André C. 2012. Isolation and characterization of nuclear microsatellite loci in the northern shrimp,Pandalus borealis. Conservation Genetic Resources. ISSN 1877-7252.  4(1), s 109- 112 . doi: 10.1007/s12686-011-9486-4.

Robalo JI, Castilho R, Francisco SM, Almada F, Knutsen H, Jorde PE, Almada VC 2012. Northern refugia and recent expansion in the North Sea: the case of the wrasseSymphodus melops (Linnaeus, 1758). Ecology and Evolution 2: 153-164.

Serbezov D, Jorde PE, Bernatchez L, Olsen EM, Vøllestad LA. 2012. Short-term genetic changes: evaluating effective population size estimates in a comprehensively described brown trout (Salmo trutta) population. Genetics 191: 579-592.

Serbezov D, Jorde PE, Bernatchez L, Olsen EM, Vøllestad LA. 2012. Life history and demographic determinants of effective/census size ratios as exemplified by brown trout (Salmo trutta). Evolutionary Applications 5: 607-618.

Simpfendorfer CA, Olsen EM, Heupel MR, Moland E. 2012. Three dimensional kernel utilization distributions improve estimates of space use in aquatic animals. Canadian Journal of Fisheries and Aquatic Sciences 69: 565–572.

2011

Star B, Nederbragt AJ, Jentoft S, Grimholt U, Malmstrøm M, Gregers TF, Rounge TB, et al. 2011. The genome sequence of Atlantic cod reveals a unique immune system. Nature 477: s207- 210.

Moland E, Olsen EM, Knutsen H, Knutsen JA, Enersen SE, André C, Stenseth NC. 2011. Activity patterns of wild European lobster (Homarus gammarus) within coastal marine reserves: implications for future reserve design. Marine Ecology Progress Series 429: 197-207.

Knutsen H, Olsen EM, Jorde PE, Espeland SH, André C, Stenseth NC. (2011). Are low but statistically significant levels of genetic differentiation in marine fishes “biologically meaningful”? A case study of coastal Atlantic cod. Molecular Ecology 20: 768-783.

Rogers L, Stige LC, Olsen EM, Knutsen H, Sik-Chan K, Stenseth N.Chr. (2011). Cod phenotypes respond to changing climate and density throughout a century on the Norwegian coast. PNAS 108: 1961-1966.

Albert OT, Lambert Y, Vollen T, Freitas C, Heggebakken L. 2011. Distinguishing pelagic and demersal swimming of deepwater flatfish by recording of body angles. American Fisheries Society Symposium 76: 1-21.

Kleiven AR, Olsen EM, Vølstad JH. 2011. Estimating recreational and commercial fishing effort for European lobster Homarus gammarus by strip transect sampling. Marine and Coastal Fisheries 3: 383–393.

Moksness E, Gjøsæter J, Lagaillarde G, Mikkelsen E, Olsen EM, Sandersen HT, Vølstad JH. 2011. Effects of fishing tourism in a coastal municipality – a case study from Risør, Norway. Ecology and Society 16: 11.

Moland E, Olsen EM, Andvord K, Knutsen JA, Stenseth, NC. 2011. Home range of European lobster (Homarus gammarus) in a marine reserve: implications for future reserve design. Canadian Journal of Fisheries and Aquatic Sciences 68: 1197–1210.

Olsen EM, Moland E. 2011. Fitness landscape of Atlantic cod shaped by harvest selection and natural selection. Evolutionary Ecology 25: 695–710.

Rogers LA, StigeLC, Olsen EM, Knutsen H, Chan K-S, Stenseth NC. 2011. Climate and population density drive changes in cod body size throughout a century on the Norwegian coast. Proceedings of the National Academy of Sciences of the USA 108: 1961–1966.

Bråthen Lund M, Olsen EM, Espeland SH, Stenseth NC. 2011. Life-history of fjord cod from the Skagerrak in the mid-2000s compared to 1905. Marine Ecology Progress Series 424: 169–174.

Olsen EM, Ottersen G, Llope M, Chan K-S, Beaugrand G, Stenseth NC. 2011. Spawning stock and recruitment in North Sea cod shaped by food and climate. Proceedings of the Royal Society B 278: 504–510.

Ohlberger J, Langangen Ø, Edeline E, Olsen EM, Winfield IJ, Fletcher JM, James JB, Stenseth NC, Vøllestad LA. 2011. Pathogen-induced rapid evolution in a vertebrate life-history trait. Proceedings of the Royal Society B 278: 35–41.

Umino T, Blanco Gonzalez E, Saito H, Nakagawa H. 2011. Problems associated with the recovery on landings of black sea bream (Acanthopagrus schlegelii) intensively released in Hiroshima Bay, Japan. In: Ceccaldi H-J, Dekeyser I, Girault M, Stora G (eds.). Global Change: Mankind-Marine Environment Interactions, Springer Science+Bussiness Media B.V., pp. 37-40.

Hunsicker M, Ciannelli L, Bailey KM, Buckel J, White W, Link J, Essington T, Gaichas S, Anderson T, Brodeur RD, Chan, KS, Chen K, Englund G, Frank K, Freitas V, Hixon M, Hurst T, Johnson D, Kitchell J, Reese D, Rose G, Sjodin H, Sydeman W, van der Veer H, Vollset K, Zador S. 2011. Functional responses and scaling in marine predator-prey interactions: contemporary issues and emerging concepts. Ecology Letters 14(12): 1288-1299.

Auth TD, Brodeur RD, Soulen HL, Ciannelli L, Peterson WT. 2011. The response of fish larvae to decadal changes in environmental forcing factors off the Oregon coast. Fisheries Oceanography 20(4): 314-328

Laurel B, Hurst T, Ciannelli L. 2011. An experimental examination of temperature interactions in the ‘match-mismatch’ hypothesis for Pacific cod larvae. Canadian Journal of Fisheries and Aquatic Sciences 68(1): 51-61.

Bartolino V, Ciannelli L, Bacheler NM, Chan KS. 2011. Ontogeny and sex disentangle density-dependent and density-independent spatiotemporal dynamics of a marine fish population. Ecology 92(1): 189-200.

Liu H, Ciannelli L, Decker MB, Ladd C, Chan KS. 2011. Shifts in jellyfish distribution relative to large-scale climate variability in the eastern Bering Sea: a new approach to analyzing zero-inflated spatio-temporal data. Journal of Agricultural, Biological and Environmental Statistics 16(2): 185-201.

Fernández-Chacón A, Bertolero A, Amengual A, Tavecchia G, Homar V, Oro D. 2011.  Spatial heterogeneity in the effects of climate change on the population dynamics of a Mediterranean tortoise. Global Change Biology 17:3075-3088.

Constenla M, Carrassón M, Moyà CM, Fernàndez-Chacón A, Padrós F, Repullés-Albelda A, Montero FE. 2011. Parasitisation by Bathycreadium elongatum (Digenea, Opecoelidae) in pyloric caeca of Trachyrincus scabrus (Teleostei, Macrouridae). Diseases of Aquatic Organisms 96:239-247.

2010

Espeland SH, Thoresen AG, Olsen EM, Stige LC, Knutsen H, Gjøsæter J, Stenseth NC .2010. Diel vertical migration patterns in young Skagerrak coastal cod. Marine Ecology Progress Series 405: 29-37.

Knutsen JA, Knutsen H, Rinde E, Christie H, Bodvin T, Dahl E. 2010. Mapping biologicalresources in the coastal zone – an evaluation of methods in a pioneering study from Norway. Ambio 39: 148-158.

Glover K, DahleG, WestgaardJI, JohansenT, Knutsen H, Jørstad KE. 2010. Genetic diversity within and among Atlantic cod (Gadus morhua) farmed in marine cages: a proof-of-concept study for the identification of escapees. Animal genetics 41(5): 515-522.

Blanco Gonzalez E, Taniguchi N, Umino T. 2010. Can ordinary single-day egg collection increase the effective population size in broodstock management programs? Breeder-offspring assignment in black sea bream (Acanthopagrus schlegelii) through two-hourly intervals. Aquaculture 308: S12-S19.

McCarthy AL, Heppella S, Royerb F, Freitas C, Dellinger D. 2010. Identification of likely foraging habitat of pelagic loggerhead sea turtles (Caretta caretta) in the North Atlantic through analysis of telemetry track sinuosity. Progress in Oceanography 86: 224-231

Serbezov D, Bernatchez L, Olsen EM, Vøllestad LA. 2010. Mating patterns and determinants of individual reproductive success in brown trout (Salmo trutta) revealed by parentage analysis of an entire stream living population. Molecular Ecology 19: 3193–3205.

Ciannelli L, Knutsen H, Olsen EM, Espeland SH, Asplin L, Jelmert A, Knutsen JA, Stenseth NC. 2010. Maintenance of small-scale genetic structure in a marine population in relation to water circulation and egg characteristics. Ecology 91: 2918–2930.

Serbezov D, Bernatchez L, Olsen EM, Vøllestad LA. 2010. Quantitative genetic parameters for wild stream-living brown trout: heritability and parental effects. Journal of Evolutionary Biology 23: 1631–1641.

Moland E, Olsen EM, Stenseth NC. 2010. Maternal influences on offspring size variation and viability in wild European lobster (Homarus gammarus). Marine Ecology Progress Series 400: 165–173.

Schindler DE, Hilborn R, Chasco B, Boatright CP, Quinn TP, Rogers LA, Webster MS. 2010. Population diversity and the portfolio effect in an exploited species. Nature 465: 609-612.

Moore JW, McClure M, Rogers LA, Schindler DE. 2010. Synchronization and portfolio performance of threatened salmon. Conservation Letters 5:340-348.

Bailey KM, Ciannelli L, Hunsicker M, Rindorf A, Neuenfeldt S, Möllman C, Guichard F, Huse G. 2010. Comparative analysis of marine ecosystems: workshop on predator–prey interactions. Biology Letters 6(5): 579-581.

Hurst T, Laurel B, Ciannelli L. 2010. Ontogenetic patterns and temperature-dependence of growth rate in early life stages of Pacific cod (Gadus macrocephalus). Fishery Bulletin 108: 382-392.

Sohn D, Ciannelli L, Duffy-Anderson J. 2010. Distribution and drift pathways of Greenland halibut (Reinhardtius hippoglossoides) early life stages in the Bering Sea. Fisheries Oceanography 19(5): 339-353.

Bacheler NM, Ciannelli L, Bailey KM, Duffy-Anderson JT. 2010. Spatial and temporal patterns of walleye pollock spawning in the eastern Bering Sea inferred from egg and larval distributions. Fisheries Oceanography 19(2): 107-120.

Brander K, Botsford L, Ciannelli L, Fogarty M, Heath M, Planque B, Shannon L, Wieland K. 2010. Human impacts on marine ecosystems. In: Barange M, Field JG, Harris RP, Hofmann EE, Perry IR, Werner F (Eds) ‘Marine ecosystems and global change’. Oxford, Biology.

2009

André C, Knutsen H. (2009). Development of twelve novel microsatellite loci in the European lobster (Homarus gammarus). Conservation Genetic Resources 1: 433-436.

Knutsen H, Catarino D, Sannæs H, Stefanni S (2009). Development of eleven microsatellite loci in the deep sea black scabbardfish (Aphanopus carbo). Conservation Genetic Resources, 1, 89-92.

Knutsen H, Jorde PE, Sannæs H, Hoelzel AR, Bergstad OA, Stefanni S, Johansen T, Stenseth NC. 2009. Bathymetric barriers promoting genetic structure in the deepwater demersal fish tusk Brosme brosme. Molecular Ecology 18: 3151-3162.

Stefanni S, Bettencourt R, Knutsen H, Menezes G. 2009. Rapid PCR-RFLP method for discrimination of the two Atlantic cryptic deep-sea species of scabbardfish. Molecular Ecology Resources 9: 528-530.

Ring AK, Knutsen H, André C. 2009. Development of ten microsatellite loci in the ling (Molva molva). Molecular Ecology Resources 9: 1401-1403.

Schneider M, Sannæs H, Jorde, PEJ, Knutsen H. 2009. Isolation and characterisation of 11 microsatellite loci in the abbysal carapine grenadier Coryphanoides carapipnus(Actinoperygii, Macrouridae) and cross amplification in two other deep-sea macrourid species. Conservation Genetics 10: 1869-1871.

Espeland SH, Olsen ME, Knutsen H, Gjøsæter J, DanielssenD, Stenseth NC. 2009. New perspectives on fish movement: kernel and GAM smoothers applied to a century of tagging data on coastal cod. Marine Ecology Progress Series 372: 231-241.

Freitas C, Kovacs KM, Ims RA, Fedak MA, Lydersen C. 2009. Deep into the ice: Over-wintering and habitat selection in male Atlantic walruses. Marine Ecology Progress Series 375: 247-261

Olsen, EM, Carlson SM, Gjøsæter J, Stenseth NC. 2009. Nine decades of decreasing phenotypic variability in Atlantic cod. Ecology Letters 12: 622–631.

Pettersen AR, Moland E, Olsen EM, Knutsen JA. 2009. Lobster reserves in coastal Norway: the process towards establishment. In: Dahl E, Moksness E, Støttrup J (eds.). Integrated coastal zone management. Wiley-Blackwell, New Jersey, USA, pp. 178–188.

Gregersen F, Vøllestad LA, Olsen EM, Haugen TO. 2009. Sibling-size variation in brown trout in relation to egg size and stream size. Journal of Fish Biology 74: 1259–1268.

Blanco Gonzalez E, Murakami T, Yoneji T, Nagasawa K, Umino T. 2009. Reduction in size-at-age of black sea bream (Acanthopagrus schlegelii) following intensive releases of cultured juveniles in Hiroshima Bay, Japan. Fisheries Research 99: 130-133.

Blanco Gonzalez E, Umino T. 2009. Fine-scale genetic structure derived from stocking black sea bream, Acanthopagrus schlegelii (Bleeker, 1854), in Hiroshima Bay, Japan. Journal of Applied Ichthyology 25: 407-410.

Blanco Gonzalez E, Murakami T, Teshima Y, Yoshioka K, Jeong D-S, Umino T. 2009. Paternity testing on wild black rockfish Sebastes inermis (brownish type) from the Seto Inland Sea of Japan. Ichthyological Research 56: 87-91.

Blanco Gonzalez E. 2009. Consideraciones genéticas básicas en la implementación de programas de repoblación de peces en ambientes marinos. Europa Azul 114: 72-73 (in Spanish).

Schindler DE, Rogers LA. 2009. Responses of Pacific salmon populations to climate variation in freshwater ecosystems. In: Krueger CC, Zimmerman CE (eds). Pacific salmon: ecology and management of western Alaska’s populations. Symposium 70. American Fisheries Society, Bethesda, Maryland, USA, pp. 1127-1142.

Bacheler NM, Bailey KM, Ciannelli L, Bartolino V, Chan KS. 2009. Density-dependent, landscape, and climate effects on spawning distribution of walleye pollock Theragra chalcogramma. Marine Ecology Progress Series 391: 1-12 (Feature article).

Hidalgo M, Massutí E, Guijarro B, Moranta J, Ciannelli L, Lloret J, Oliver P, Stenseth NC. 2009. Population effects and life-history traits changes under phase transitions induced by long-term fishery harvesting: European hake off the Balearic Islands. Canadian Journal of Fisheries and Aquatic Sciences 66(8): 1355-1370

Llope M, Chan KS, Ciannelli L, Reid PC, Stige LC, Stenseth NC. 2009. Effects of environmental conditions on the seasonal distribution of phytoplankton biomass in the North Sea. Limnology & Oceanography 54(2): 512-524.